CDS

Accession Number TCMCG007C59526
gbkey CDS
Protein Id XP_018510622.1
Location join(43924010..43924066,43924344..43924550,43924622..43924721,43924814..43924896,43924967..43925023,43925103..43925255,43925508..43925586,43925674..43925822,43925915..43926049,43926139..43926252,43926325..43926435,43926507..43926615,43926697..43926770)
Gene LOC103843494
GeneID 103843494
Organism Brassica rapa

Protein

Length 475aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018655106.2
Definition prolycopene isomerase, chloroplastic isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category H
Description isomerase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R07512        [VIEW IN KEGG]
KEGG_rclass RC01960        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09835        [VIEW IN KEGG]
EC 5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009662        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046608        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACACATTCGATGTTGGCTCTTCTGTCATGTTTGGTTTCAGCGATAAGGTTCGGGAATCTAAACTTGATAACTCAAGCGTTGAAAGCAGTTGGTCGTGAGATGGAGGTTATACCTGATCCCACCACCGTTCATTTCCATCTTCCCAATGATCTCTCTGTTCAGGTTCATAGAGAGTATGATGAGTTCGTTAATGAGCTTATTAGCAAGTTTCCGCACGAGAAGGAAGGGATTCTTGGATTCTATGGCATCTGCTGGAAGATCTTCAACTCATTGAACTCTTTGGAACTGAAGTCGCTTGAAGAGCCTATCTACCTTTTTGGACAGTTCTTTCAGAAGCCGCTTGAATGCTTGACACTCGCTTATTACTTGCCTCAAAATGCTGGGGATATAGCTCGGAAGTACATAAAGGATCCTCAGTTACTGTCTTTCATTGACGCAGAGTGTTTCATTGTGAGTACAGTCAATGCTTTGCAGACGCCAATGATCAATGCAAGTATGGTTTTATGTGACAGGCACTATGGAGGGATTAACTACCCTGTTGGTGGTGTTGGTGGGATTGCAAGGTCTTTAGCAGGAGGACTAGTTGATCAAGGAAGTGAAATACTCTACAAAGCTAATGTGAAAAGCATAATTCTTGATGATGGAAAGGCTGTGGGTGTAAGGCTAGCAGATGGAAGAGAGTTCTTCGCTAAAACAATAATTTCTAATGCTACAAGATGGGATACGTTTGGGAAGCTGTTGAAAGGAGAAAAGCTTCCAAAAGAAGAAGAAAACTTCCAGAAAGTCTATGTGAAGGCTCCATCGTTTCTCTCAATCCACATGGGTGTTAAAGCAGAGGTTCTCCCTCCAGATACAGATTGCCATCATTTCGTACTTGAGGATGATTGGAAGAATCTGGAGGAGCCTTATGGCAGTATCTTCCTCAGCATCCCAACCATTCTTGATCCATCCTTGGCTCCAGATGGTCGACATATACTCCACATATTTACAACTTCTTCCATTGAAGATTGGGAGGGACTCACTCCAAAAGAGTATGAGGCTAAAAAAGAAGAGGTGGCAGCTGGAATCATACAGAGGCTAGAGAAAAAACTGTTTCCTGGGCTCAGTTCATCTATTACTTTTAAGGAGGTGGGCACACCAAGAACACACAGGCGATATCTTGCTAGGGATAAGGGAACGTATGGACCAATGCCAAGAGGAACACCAAAAGGTTTACTAGGCATGCCGTTTAACACAACTGCTATAGATGGTTTGTACTGCGTTGGGGATAGTTGTTTTCCTGGTCAGGGAGTTATAGCTGTGGCTTTCTCAGGAGTGATGTGTGCTCATCGTGTAGCTGCTGACATTGGGCTTGAGAGAAAATCAAAGGTACTTGATGCTGGTCTTCTTGGTTTACTTGGTTGGTTAAGGACACTCGCATAG
Protein:  
MDTHSMLALLSCLVSAIRFGNLNLITQALKAVGREMEVIPDPTTVHFHLPNDLSVQVHREYDEFVNELISKFPHEKEGILGFYGICWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVGGIARSLAGGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNATRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPYGSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLTPKEYEAKKEEVAAGIIQRLEKKLFPGLSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLERKSKVLDAGLLGLLGWLRTLA